T-COFFEE, Version_11.00.8cbe486 (2014-08-12 22:05:29 - Revision 8cbe486 - Build 477)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=1000
*
 BAD AVG GOOD
*
Ambrosia_artemi   : 100
Nymphaea_alba     : 100
Arabidopsis_tha   : 100
Commelina_diffu   : 100
Lolium_multiflo   : 100
Lolium_rigidum    : 100
Oryza_sativa      : 100
Sorghum_halepen   : 100
Eleusine_indica   : 100
Solanum_lycoper   : 100
Nicotiana_tabac   : 100
Convolvulus_arv   : 100
Euphorbia_heter   : 100
Abutilon_theoph   : 100
Gossypium_hirsu   : 100
Plantago_lanceo   : 100
Amaranthus_livi   : 100
Amaranthus_tube   : 100
Amaranthus_rudi   : 100
Amaranthus_palm   : 100
Amaranthus_hybr   : 100
Amaranthus_viri   : 100
Kochia_scoparia   : 100
Chenopodium_alb   : 100
Amaranthus_grae   : 100
Petunia_x_hybri   : 100
Ambrosia_trifid   : 100
Conyza_canadens   : 100
Cirsium_setosum   : 100
Conyza_sumatren   : 100
Erigeron_annuus   : 100
cons              : 100

Ambrosia_artemi   ---------------------------------------------------------------
Nymphaea_alba     ---------------------------------------------------------------
Arabidopsis_tha   -MAQVSRICNGVQNP-SLISNLSKSS-QRKSPLS----VSLKTQQHPRAYPISSSWGLKKSGM
Commelina_diffu   MAAKTLALSPSSPAA-IAGARRSSPAPPPALVRL-----------------GSGPKAAPLGAL
Lolium_multiflo   -MAQATTINNGVHTG-QLHHTLPKTQ-LPKSSKT----LNFGSNLR------ISPKFMSLTNK
Lolium_rigidum    ---------------------------------------------------------------
Oryza_sativa      -MAATMASNAAAAAAVSLDQAVAAS-------------AAFSSRKQ--LRLPAAARGGMRVRV
Sorghum_halepen   ---------------------------------------------------------------
Eleusine_indica   ---------------------------------------------------------------
Solanum_lycoper   -MAQISSMAQGIQTLSLNSSNLSKTQKGPLVSNS----LFFGSKKLTQISAKSLGVFKKDSVL
Nicotiana_tabac   -MAQISSMGQGIRTP-NLNSYLPKTQKVPLFSHS----IFIGSKKI---TQNSAKSLWVSKED
Convolvulus_arv   -MAQVNNMMQGLRLS-PSNLSKPQTH-MPSHS------ILLGSNTL--KNPSVSVKVLKSGKD
Euphorbia_heter   -MAQVSKFCNGVQKT-SIFPNFPKPE-TPKSVPS----FSIRSSFN------GSPISSGLNRR
Abutilon_theoph   ---------------------------------S----VSFRSNLK--GGFSNSRGLCLNSNG
Gossypium_hirsu   MATQFGKIYNGTQKT-CVLPNVSKTQ-NPKHVPF----VSFKSNLN---GKTSSWGLVVKNNG
Plantago_lanceo   ---------------------------------------------------------------
Amaranthus_livi   ---------------------------------------------------------------
Amaranthus_tube   -MAQATTINNGVQTG-QLHHTLPKTH-LPKSSKI----VNFGSNLR------ISPKFMSLTNK
Amaranthus_rudi   -MAQATAINNGVQTG-QLHHTLPKTH-LPKSSKI----VNFGSNLR------ISPKFMSLTIK
Amaranthus_palm   -MAQATTINNGVHTG-QLHHTLPKTQ-LPKSSKT----LNFGSNLR------ISPKFMSLTNK
Amaranthus_hybr   -MAQATTINNGVQTG-QLHHILPKTH-LPKSSKT----LNFGSNLR------ISPKFMSLTNK
Amaranthus_viri   -MAQATTINNGVQTG-QLHHILPKTH-LPKSSKT----LNFGSNLR------ISPKFMSLTNK
Kochia_scoparia   -MAQATTFNNGVKNGHQLCANLPKTH-LPKSQKA----VKFGSNLR------FSPKLKSFNNE
Chenopodium_alb   ---------------------------------------------------------------
Amaranthus_grae   -MAQATTINNGVQTG-QLHHTLPKTH-LPKSSKT----VNFGSNLR------FSPKFMSLTNK
Petunia_x_hybri   -MAQINNMAQGIQTL-NPNSNFHKPQ-VPKSSSF----LVFGSKKL----KNSANSMLVLKKD
Ambrosia_trifid   -MAXATTINNGVQTG-QLHHTLPKTH-LPKSSKT----VNFGSNLR------MSPKS------
Conyza_canadens   MAVHINNSNIPIFNTSNLTTQNPSS----KSSSF----LSFGSNFK--------NPLRNNNNN
Cirsium_setosum   MSVHVSKIVKNLQTA-NYTPNLTKTH-NPSFKSSPLSFLSFGSKFK------NPLIQVSVSSN
Conyza_sumatren   ---------------------------------------------------------------
Erigeron_annuus   ---------------------------------------------------------------

cons                                                                             


Ambrosia_artemi   ---------------------------------------------------------------
Nymphaea_alba     ---------------------------------------------------------------
Arabidopsis_tha   TLIGSELRP------LKVMS-SVSTAEKAS-----EIVLQPIREISGLIKLPGSKSLSNRILL
Commelina_diffu   RVFGRRPAA------LRV-A-AAAAVKTAAAAEE-EIVLEPIREVSGVVKLPGSKSLSNRILL
Lolium_multiflo   RVGGQSSIV------PKIQA-SVAAAAEKPSSVP-EIVLQPIKEISGTVQLPGSKSLSNRILL
Lolium_rigidum    -------------------A-TSVAAPAAPAGAE-EVVLQPIREISGAVQLPGSKSLSNRILL
Oryza_sativa      RARGRREAV------VVASA-SSSSVAAPAAKAE-EIVLQPIREISGAVQLPGSKSLSNRILL
Sorghum_halepen   ------------------------------AGAE-EIVLQPIKEISGTVKLPGSKSLSNRILL
Eleusine_indica   ------------------------------AGAE-EVVLQPIKEISGVVKLPGSKSLSNRILL
Solanum_lycoper   RVVRKSS--------FRISA-SVATAEKPH-----EIVLXPIKDISGTVKLPGSKSLSNRILL
Nicotiana_tabac   SVLRVAKSP------FRISA-SVVTAQKPN-----EIVLQPIKDISGTVKLPGSKSLSNRILL
Convolvulus_arv   SIFTAARSP------LKVRA-SVATAKKPSMAPE-EIVLQPIKEISGTVKLPGSKSLSNRILL
Euphorbia_heter   RTKGDCIVVKGKASSFKVSA-SVATT-EKPSTSP-EIVLQPIKEISGTVTLPGSKSLSNRILL
Abutilon_theoph   KLGTIKVRP------GVVSA-STAATAEKPSSAS-EIVLQPINEISGTVKLPGSKSLSNRILL
Gossypium_hirsu   KFGSIKVRS------LKVSA-STATA-EKPSRAS-EIVLQPINEISGTVKLPGSKSLSNRILL
Plantago_lanceo   ---------------------------------------------------------------
Amaranthus_livi   ---------------------------------------------------------------
Amaranthus_tube   RVGGQSSII------PKIQA-SVAAAAEKPSSVP-EIVLQPIKEISGTIQLPGSKSLSNRILL
Amaranthus_rudi   RVGGQSSII------PKIQA-SVAAAAEKPSSVP-EIVLQPIKEISGTIQLPGSKSLSNRILL
Amaranthus_palm   RVGGQSSIV------PKIQA-SVAAAAEKPSSVP-EIVLQPIKEISGTVQLPGSKSLSNRILL
Amaranthus_hybr   RVGGQSSIV------PKIQA-SVAAAAEKPSSVP-EIVLQPIKEISGTVQLPGSKSLSNRILL
Amaranthus_viri   RVGGQSSIV------PKIQA-SVAAAAEKPSSVP-EIVLQPIKEISGTVQLPGSKSLSNRILL
Kochia_scoparia   RVSGKSSVV------FKVHA-SVAAA---PSTSP-EIVLQPIKEISGTVQLPGSKSLSNRILL
Chenopodium_alb   ---------------------------------------------------------------
Amaranthus_grae   RVGGQSSIV------PRIQA-TVAAASEKPSSAP-EIVLQPIKEISGTVQLPGSKSLSNRILL
Petunia_x_hybri   SIFMQKFCS------FRISA-SVATAQKPS-----EIVLQPIKEISGTVKLPGSKSLSNRILL
Ambrosia_trifid   ---------------LAVAA-SVATTEK--SSVE-EIVLKPIKEISGTVNLPGSKSLSNRILL
Conyza_canadens   NYTSVSCNVKNNKNPFKVSAFSATSTKEKPSKAPEEIVLKPIQEISGTVHLPGSKSLSNRILL
Cirsium_setosum   QNLGRNS--------LSISA-SVAST-DKPSTAP-EIVLQPIKEISGTVNLPGSKSLSNRILL
Conyza_sumatren   ----------------------------KPSTVP-EIVLQPIKEISGAVNLPGSKSLSNRILL
Erigeron_annuus   ---------------------------------------------------------------

cons                                                                             


Ambrosia_artemi   ------GTTVVDNLLNSEDVHHMLVALGKLGLHVEHDSEKKQAIVEGCAGRFPVGKGEGQEIE
Nymphaea_alba     --------------------------LRTLGLRVDEDRDMKRAIVEGCSGQFPVAKDSAKEVE
Arabidopsis_tha   LAALSEGTTVVDNLLNSDDINYMLDALKRLGLNVETDSENNRAVVEGCGGIFPASIDSKSDIE
Commelina_diffu   LAALAEGTTVVDNLLNSDDVRYMLAALRTLGLSVEDDVATKRAVVEGSGGHFPVGNESK-EVE
Lolium_multiflo   LSALSEGTTVVDNLLNSEDVHYMLEALDALGLSVEADKVAKRAVVVGCGGRFPIEKDAKEEVK
Lolium_rigidum    LSALSEGTTVVDNLLNSEDVHYMLEALDALGLSVEADKVAKRALVVGCGGRFPIEKDAKEEVK
Oryza_sativa      LSALSEGTTVVDNLLNSEDVHYMLEALKALGLSVEADKVAKRAVVVGCGGKFPVEKDAKEEVQ
Sorghum_halepen   LAALSEGTTVVDNLLNSEDVHYMLGALNTLGLSVEADKVAKRAVAVGCGGKFPV-EDAKEEVQ
Eleusine_indica   LSALAEGTTVVDNLLNSEDVHYMLGALKTLGLSVEADKAAKRAVVVGCGGKFPVEKDAKEEVQ
Solanum_lycoper   LAALSEGRTVVDNLLSSDDIHYMLGALKTLGLHVEDDNENQRAIVEGCGGQFPVGKKSEEEIQ
Nicotiana_tabac   LAALSKGRTVVDNLLSSDDIHYMLGALKTLGLHVEDDNENQRAIVEGCGGQFPVGKKSEEEIQ
Convolvulus_arv   LAALSQGTTVVDNLLSSDDIHYMLGALGTLGLRVEEDSAIQRATVEGSGGLFPASNESNDEIQ
Euphorbia_heter   LAALSEGTTVVDNLLNSDDVHYMLGALKTLGLRVEDNSELKQAIVEGCGGQFPVGKESKKDIQ
Abutilon_theoph   LAALSEGTTVVDNLLNSDDVHHMLVALGKLGLRVEHDSEKKRAIVEGCGGQFPVGKGEGQEIE
Gossypium_hirsu   LAALSEGTTVVENLLNSDDVHHMLVALGKLGLYVKHDSEKKQAIVEGCGGQFPVGKGEGQEIE
Plantago_lanceo   --------------------------LRTLGLDVEEDKANQRATVGGCGGLFPVSKESKDEIQ
Amaranthus_livi   ------------------------------------------RVVVVC---FLFGKDGKEEIQ
Amaranthus_tube   LAALSQGTTVVDNLLYSDDILYMLDALRTLGLKVEDDNTDKRAVVEGCGGLFPVGKDGKEEIQ
Amaranthus_rudi   LAALSEGTTVVDNLLYSDDILYMLDALRTLGLKVDDDNTDKRAVVEGCGGLFPVGKDGKEEIQ
Amaranthus_palm   LAALSEGTTVVDNLLYSDDILYMLDALRTLGLKVEDDSTAKRAVVEGCGGLFPVGKDGKEEIQ
Amaranthus_hybr   LAALSEGTTVVDNLLYSDDILYMLDALRTLGLKVEDDNTAKRAVVEGCGGLFPVGKDGKEEIQ
Amaranthus_viri   LAALSEGTTVVDNLLYSDDILYMLDALRTLGLKVEDDNTAKRAVVEGCGGLFPVGKDGKEEIQ
Kochia_scoparia   LAALSEGTTVLDNLLYSDDIRYMLDALRTLGLNVEDDNKAKRAIVEGCGGLFPAGKENRSEIE
Chenopodium_alb   --------------------------LRTLGLNVEDDKTAKRAIVEGCGGLFPAGKEGGGEVE
Amaranthus_grae   LAALSEGTTLVDNLLYSDDIRYMLDALRALGLKVEDDNTAKRAVXXXXXXXXXXXXXXXXXXX
Petunia_x_hybri   LAALSEGTTVVDNLLSSDDIHYMLGALKTLGLHVEEDSANQRAVVEGCGGLFPVGKESKEEIQ
Ambrosia_trifid   LAALAEGTTVVDNLLYSDDILYMLDALRTLGLKVEDDSTAKRAVVEGCGGLFPVGKDGKEEIQ
Conyza_canadens   LAALSEGTTVVDNLLNSDDVHYMLGALRALGLNVEENSAIKRAIVEGCGGVFPVGKEAKDEIQ
Cirsium_setosum   LAALSEGTTVVDNLLNSDDVHYMLGALKTLGLRVEENGATKTAIVEGCGGVFPVGKEAKDEIE
Conyza_sumatren   LAALAEGTTIVDNLLNSDDVHYMLGALRTLGLNVEEDGAIKRAIVEGCGGMFPVGKEAKDDIQ
Erigeron_annuus   -------------LLNSDDVHYMLGALRTLGLNVEEDGAIKRAIVEGCGGVFPVGKEAKDDIQ

cons                                                                             


Ambrosia_artemi   LFLGNAGTAMRPLTAAVTAAGGNSSYILDGIPRMRERPIEDLVTGLKQLGADVDCTLGTNCPP
Nymphaea_alba     LFLGNAGTAMRPLTAAVVAAGGNTRYILDGVPRMRERPIGDLVSGLQQLGADIGCTLGTNCPP
Arabidopsis_tha   LYLGNAGTAMRPLTAAVTAAGGNASYVLDGVPRMRERPIGDLVVGLKQLGADVECTLGTNCPP
Commelina_diffu   LFLGNAGTAMRPLTAAVTAAGGNASYILDGVPRMRERPIGDLVDGLKQLGADADCFLGTNCPP
Lolium_multiflo   LFLGNAGTAMRPLTAAVVAAGGNATYVLDGVPRMRERPIGDLVVGLKQLGANVDCFLGTDCPP
Lolium_rigidum    LFLGNAGTAMRPLTAAVVAAGGNASYVLDGVPRMRERPIGDLVVGLKQLGANVDCFLGTDCPP
Oryza_sativa      LFLGNAGTAMRPLTAAVTAAGGNATYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTECPP
Sorghum_halepen   LFLGNAGTAMRPLTAAVTAAGGNATYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTDCPP
Eleusine_indica   LFLGNAGTAMRPLTAAVTAAGGNATYVLDGVPRMRERPVGDLVVGLKQLGADVDCFLGTDCPP
Solanum_lycoper   LFLGNAGTAMRPLTAAVTVAGGHSRYVLDGVPRMRERPIGDLVDGLKQLGAEVDCSLGTNCPP
Nicotiana_tabac   LFLGNAGTAMRPLTAAVTVAGGHSRYVLDGVPRMRERPIGDLVDGLKQLGAEVDCFLGTNCPP
Convolvulus_arv   LSLGNAGTAMRPLTAAVVAAGGNARYVLDGVPRMRERPIGDLVEGLKQLGADIDCFLGTNCPP
Euphorbia_heter   LFLGNAGTAMRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVTGLKQLGADVTCS-STNCPP
Abutilon_theoph   LFLGNAGTAMRPLTAAITAAGGNSSYVLDGVPRMRERPIGDLVTGLKQLGADVDCTLGTNCPP
Gossypium_hirsu   LFLGNAGTAMRPLTAAITAAGGNSSYVLDGVPRMRERPIGDLVTGLKQLGADVDCTLGTNCPP
Plantago_lanceo   LFLGNAGTAMRPLTAAVVAAGGDATYVLDGVPRMRERPIGDLVTGLKQLGADIDCFLGTKCPP
Amaranthus_livi   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Amaranthus_tube   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Amaranthus_rudi   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Amaranthus_palm   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Amaranthus_hybr   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Amaranthus_viri   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Kochia_scoparia   LFLGNAGTAMRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTNCPP
Chenopodium_alb   LFLGNAGTAMRPLTAAVAVAGGKSSYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTDCPP
Amaranthus_grae   XXXXXXXXXXRPLTAAVAVAGGNSSYVLDGVPRMRERPIGDLVAGLKQLGSDVDCFLGTNCPP
Petunia_x_hybri   LFLGNAGTAMRPLTAAVTVAGGNSRYVLDGVPRMRERPISDLVDGLKQLGAEVDCFLGTKCPP
Ambrosia_trifid   LFLGNAGTAMRPLTAAVAVAGGNSSYILDGVPRMRERPIGDLVTGLKQLGADVDCFLGTNCPP
Conyza_canadens   LFLGNAGTAMRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVTGLKQLGANVDCSLGTNCPP
Cirsium_setosum   LFLGNAGTAMRPLTAAVTAAGGNSSYVLDGVPRMRERPIGDLVTGLKQLGADVDCFLGTNCPP
Conyza_sumatren   LFLGNAGTAMRPLTAGVTAAGGNSSYVLDGVPRMRERPIGDLVTGLKQLGADVDCSLGTNCPP
Erigeron_annuus   LFLGNAGTAMRPLTAAVTAAGGNSSYVLDGVPRMRERPIGDLVMGLKQLGADVDCSLGTNCPP

cons                        *****.:..***.: *:***:*******: *** **:***::  *  .*.***


Ambrosia_artemi   VYINGKGGLPGGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Nymphaea_alba     VYINGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEVEMADKLVSVPYVEMTLKLMERF
Arabidopsis_tha   VRVNANGGLPGGKVKLSGSISSQYLTALLMSAPLALGDVEIEIVDKLISVPYVEMTLKLMERF
Commelina_diffu   VRVNAKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERF
Lolium_multiflo   VRINGIGGLPGGKVKLSGSISSQYLSSLLMAAPLALGDVEIEIIDKLISVPYVEMTLRLMERF
Lolium_rigidum    VRINGIGGLPGGK-KLSGSISSQYLSSLLMAAPLALGDVEIEIIDKLISVPYVEMTLRLMERF
Oryza_sativa      VRVKGIGGLPGGKVKLSGSISSQYLSALLMAAPLALGDVEIEIIDKLISIPYVEMTLRLMERF
Sorghum_halepen   VRINGIGGLPGGKVKLSGSISSQYLSALLMAAPLALGDVEIEIIDKLISIPYVEMTLRLMERF
Eleusine_indica   VRVKGIGGLPGGKVKLSGSISSQYLSALLMAAPLALGDVEIEIIDKLISIPYVEMTLRLMERF
Solanum_lycoper   VRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERF
Nicotiana_tabac   VRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERF
Convolvulus_arv   VRVIGKGGLPRGKVKLSGSVSSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTIKLMERF
Euphorbia_heter   VHVNANGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERY
Abutilon_theoph   VRINGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTIKLMERF
Gossypium_hirsu   VRIEGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTIKLMERF
Plantago_lanceo   VRVIGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERF
Amaranthus_livi   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEIEIVDKLISVPYVEMTIRLMERF
Amaranthus_tube   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEIEIVDKLISVPYVEMTIRLMERF
Amaranthus_rudi   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEIEIVDKLISVPYVEMTIRLMERF
Amaranthus_palm   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEIEIVDKLISVPYVEMTIKLMERF
Amaranthus_hybr   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEIEIVDKLISVPYVEMTIRLMERF
Amaranthus_viri   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEIEIVDKLISVPYVEMTIRLMERF
Kochia_scoparia   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLALGDVEVEIIDKLISVPYVEMTIKLMERF
Chenopodium_alb   VRVNANGGLPGGKVKLSGSVSSQYLTALLMATPLGLGDVEVEIIDKLISVPYVEMTIKLMERF
Amaranthus_grae   VRVNAKGGLPGGKVKLSGSVSSQYLTALLMATPLGVGDVEIEIVDKLISVPYVEMTIRLMERF
Petunia_x_hybri   VRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERF
Ambrosia_trifid   VRVAANGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERF
Conyza_canadens   VRVVGSGGLPGGKVKLSGSISSQYLTSLLMAAPLALGDVEIEIIDKLISVPYVRMTLKLMQRF
Cirsium_setosum   VRVIGSGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERF
Conyza_sumatren   VRVVGGGGLPGGRVKLSGSISSQYLTALLMASPLALGDVEIEIIDKLISIPYVEMTLKLMEWF
Erigeron_annuus   VRVVGGGGLPGGKVKLSGSISSQYLTALLMASPLALGDVEIEIIDKLISIPYVEMTLKLMERF

cons              * : . **** *:                                                  


Ambrosia_artemi   XXXXXXXXXXXXXXXXXXXXXXSPGNAYVEGDASSASYFLAGAAVTGGTITVEGCGTSSLQGD
Nymphaea_alba     GVAVEHGGGWDRFLIRGRQMYMSPGSAYVEGDASSASYFLAGAAITGGTVTVEGCGTSSLQGD
Arabidopsis_tha   GVSVEHSDSWDRFFVKGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGD
Commelina_diffu   GVKVEHSESWDRFLIKGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVEGCGTTSLQGD
Lolium_multiflo   GVTAEHSDSWDRFYIKGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVQGCGTTSLQGD
Lolium_rigidum    GVTAEHSDSWDRFYIKGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVQGCGTTSLQGD
Oryza_sativa      GVKAEHSDSWDRFYIKGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVQGCGTTSLQGD
Sorghum_halepen   GVKAEHSDSWDRFYIKGDQKYKSPKNAYVEGDASSASYFLAGAAITGGTVTVEGCGTTSLQGD
Eleusine_indica   GVKAEHSDSWDRFYIKGGQKYKSPKNAYVEGDASSASYFLAGAAITGGTVTVEGCGTTSLQGD
Solanum_lycoper   GVFVEHSSGWDRFLVKGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGD
Nicotiana_tabac   GVSVEHTSSWDKFLVRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGD
Convolvulus_arv   GVSVEHSDSWDRFYIRGGQKYKSPGNAYVEGDASSASYFLAGAAVTGGTITVEGCGTSSLQGD
Euphorbia_heter   GVSVQHSNSWDRFFIPGGQKYKSPGNSYVEGDASSASYFLAGAAITGGTITVEGCGTSSLQGD
Abutilon_theoph   GVSVEHSNSWDRFFIRGGQKYKSPGNAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGD
Gossypium_hirsu   GVTVEHTDSWDRFFIRGGQKYMSPGNAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGD
Plantago_lanceo   GVYVEHTDSWDRFLVRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGD
Amaranthus_livi   GVSVEHSDSWDRFYIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Amaranthus_tube   GVSVEHSDSWDRFFIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Amaranthus_rudi   GVSVEHSDSWDRFFIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Amaranthus_palm   GVSVEHSDSWDRFYIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Amaranthus_hybr   GVSVEHSDSWDRFYIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Amaranthus_viri   GVSVEHSDSWDRFYIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Kochia_scoparia   GVSIEHTASWDRFLIRGGQKYKSPGNAFVEGDASSASYFLAGAAITGGTVTVEGCGTSSLQGD
Chenopodium_alb   GVSVEHSANWDRFLIRGGQKYKSPGNAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGD
Amaranthus_grae   GVSVEHSDSWDRFYIRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVKGCGTSSLQGD
Petunia_x_hybri   GISVEHSSSWDRFFVRGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGTITVEGCGTNSLQGD
Ambrosia_trifid   GVSVEHSDSWDKFYVRGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVEGCGTSSLQGD
Conyza_canadens   GVSVEHSDTLDRFHVRGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVEGCGTSSLQGD
Cirsium_setosum   GVSVQHTDSWDKFLIRGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTITVEGCGTSSLQGD
Conyza_sumatren   GVSVEHSDSWDRFFIRGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTITVEGCGTSSLQGD
Erigeron_annuus   GVSVEHSDSWDRFFIRGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTITVEGCGTSSLQGD

cons                                    ** .::****************:** *:**:****.*****


Ambrosia_artemi   VKFAEVLENMGAKVTWTQNSVTVTGPPRIPEGRKHLRPVDVNMNKMPDVAMTLAVVALYADGP
Nymphaea_alba     VKFAEVLEKMGAKVTWSQNSVTVTGPPKD--GSR-----------------------------
Arabidopsis_tha   VKFAEVLEKMGCKVSWTENSVTVTGPPRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGP
Commelina_diffu   VNFAAVLEKMGAKVTWTENSVTVTGPPRDPSKRTNLHGIDVNMNKMPDVAMTLAVVALFADG-
Lolium_multiflo   VKFAEVLEMMGAKVTWTDTSVTVTGPPRQPFGRKHLKAVDVNMNKMPDVAMTLAVVALFADGP
Lolium_rigidum    VKFAEVLEMMGAKVTWTDTSVTVTGPPRQPFGRKHLKAVDVNMNKMPDVAMTLAVVALFADGP
Oryza_sativa      VKFAEVLEMMGAKVTWTDTSVTVTGPPREPYGKKHLKAVDVNMNKMPDVAMTLAVVALFADGP
Sorghum_halepen   VKFAEVLEMMGAKVTWTDTSVTVTGPPRQPFGRKHLKAVDVNMNKMPDVAMTLAVVALFADGP
Eleusine_indica   VKFAEVLEMMGAKVTWTETSVTVTGPQREPFGRKHLKAIDVNMNKMPDVAMTLAVVALFADGP
Solanum_lycoper   VKFAEVLEKMGAEVTWTENSVTVKGPPRNSSGMKHLRAIDVNMNKMPDVAMTLAVVALFADGP
Nicotiana_tabac   VKFAEVLEKMGAEVTWTENSVTVKGPPRNSSGMKHLRAVDVNMNKMPDVAMTLAVVALFADGP
Convolvulus_arv   VKFAEVLEKMGAEVSWTENSVTVKGPPRGPFGRKHLRGIDVNMNKMPDVAMTLAVVALYADGP
Euphorbia_heter   VKFAEVLEKMGARVTWTENSVTVTGPPRDSPRQKHLRAIDVNMNKMPDVAMTLAVVALFADGP
Abutilon_theoph   VKFAEVLEMMGAKVTWTENSVTVTGPPRNSFGRKQLRAIDVNMNKMPDVAMTLAVVALYADGP
Gossypium_hirsu   VKFAEVLEMMGAKVTWTKNSVTVTGPPRNPSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Plantago_lanceo   VKFAEVLEKMGAEVTWTENSVTVKGPPRNSSGRKHLRAI------------------------
Amaranthus_livi   VKFAEVLEKMGCKVTWTENSVTVTGPPRDSSGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP
Amaranthus_tube   VKFAEVLEKMGCTVTWTENSVTVTGPPRESSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Amaranthus_rudi   VKFAEVLEKMGCKVTWTDNSVTVTGPPRESSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Amaranthus_palm   VKFAEVLEKMGCKVTWTENSVTVTGPPRDSSGKKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Amaranthus_hybr   VKFAEVLEKMGCKVTWTENSVTVTGPPRDSSGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP
Amaranthus_viri   VKFAEVLEKMGCKVTWTENSVTVTGPPRDSSGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP
Kochia_scoparia   VKFAEVLEKMGCKVTWTETSVTVTGPPRDSSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Chenopodium_alb   VKFAEVLEKMGCKVTWTENSVTVTGPPRDSSGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP
Amaranthus_grae   VKFAEVLEKMGCKVTWTENSVTVTGPPRDSSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Petunia_x_hybri   VKFAEVLEKMGAEVTWTENSVTVKGPPRSSSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGP
Ambrosia_trifid   VKFAEVLGQMGAEVTWTENSVTVKGPPRDAFGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP
Conyza_canadens   VKFAEVLGQMGAEVTWTENSVTVKGPPRNSSGRGHLRPVDVNMNKMPDVAMTLAVVALYADGP
Cirsium_setosum   VKFAEVLGQMGAEVTWTENSVTVKGPPRNSSGRKHLRPVDVNMNKMPDVAMTLAVVALYADGP
Conyza_sumatren   VKFAEVLGQMGAEVTWTENSVTVKGPPRDSSGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP
Erigeron_annuus   VKFAEVLGQMGAEVTWTENSVTVKGPPRDSSGRKHLRAVDVNMNKMPDVAMTLAVVALYADGP

cons              *:** **  **. *:*:..****.** :                                   


Ambrosia_artemi   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAF
Nymphaea_alba     ---------------------------------------------------------------
Arabidopsis_tha   TTIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPKKVKTAEIDTYDDHRMAMAF
Commelina_diffu   ---------------------------------------------------------------
Lolium_multiflo   TAIRDVASWRVKETERMVAIRTELTKLGATVEEGPDYCIITPPEKLNVTAIDTYDDHRMAMAF
Lolium_rigidum    TAIRDVASWRVKETERMVAIRTELTKLGATVEEGPDYCIITPPEKLNVTAIDTYDDHRMAMAF
Oryza_sativa      TAIRDVASWRVKETERMVAIRTELTKLGASVEEGPDYCIITPPEKLNITAIDTYDDHRMAMAF
Sorghum_halepen   TAIRDVASWRVKETERMVAIRTELTKLGATVEEGPDYCIITPPEKLNITAIDTYDDHRMAMAF
Eleusine_indica   TAIRDVASWRVKETERMVAIRTELTKLGASVEEGPDYCIITPPEKLNVTAIDTYDDHRMAMAF
Solanum_lycoper   TTIRDVASWRVKETERMIAICTELRKLGATVVEGSDYCIITPPEKLNVTEIDTYDDHRMAMAF
Nicotiana_tabac   TAIRDVASWRVKETERMIAICTELRKLGATVVEGSDYCIITPPEKLNVTEIDTYDDHRMAMAF
Convolvulus_arv   TAIRDVASWRVKETERMIAICTELRKLGAIVEEGPDYCIITPPEKLNVTEIDTYDDHRMAMAF
Euphorbia_heter   TAIRDVASWRVKETERMIAVCTELRKLGATVEEGADYCVITPPEKLNITEIDTYDDHRMAMAF
Abutilon_theoph   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAF
Gossypium_hirsu   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDFCVITPPEKLNVTAIDTYDDHRMAMAF
Plantago_lanceo   ---------------------------------------------------------------
Amaranthus_livi   TAIRDVASWR-----------------------------------------------------
Amaranthus_tube   TAIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPEKLNPTAIETYDDHRMAMAF
Amaranthus_rudi   TAIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPEKLIPTAIETYDDHRMAMAF
Amaranthus_palm   TAIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPEKLNPTAIETYDDHRMAMAF
Amaranthus_hybr   TAIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPEKLNPTAIETYDDHRMAMAF
Amaranthus_viri   TAIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPEKLNPTAIETYDDHRMAMAF
Kochia_scoparia   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAF
Chenopodium_alb   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAF
Amaranthus_grae   TAIRDVASWRVKETERMIAICTELRKLGATVEEGSDFCVITPPEKLNPTAIETYDDHRMAMAF
Petunia_x_hybri   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCIITPPEKLNVTDIDTYDDHRMAMAF
Ambrosia_trifid   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPERLNVAAIDTYDDHRMAMAF
Conyza_canadens   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAF
Cirsium_setosum   TTIRDVASWRVKETERMIAICTELRKLGATVEEGADYCVITPPEKLNVVAIDTYDDHRMAMAF
Conyza_sumatren   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAF
Erigeron_annuus   TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDD-------

cons                                                                             


Ambrosia_artemi   SLAACADVPVTIKDPGCTRKTFPDYFEVLERFTKH
Nymphaea_alba     -----------------------------------
Arabidopsis_tha   SLAACADVPITINDPGCTRKTFPDYFQVLERITKH
Commelina_diffu   -----------------------------------
Lolium_multiflo   SLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN
Lolium_rigidum    SLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN
Oryza_sativa      SLAACADVPVTIRDPGCTRKTFPNYFDVLSTFVRN
Sorghum_halepen   SLAACAEVPVTIRDPGCTRKTFPNYFDVLSTFVKN
Eleusine_indica   SLAACADVPVTIRDPGCTRKTFPDYFDVLSTFVKN
Solanum_lycoper   SLAACADVPVTIKNPGCTRKTFPDYFEVLQKYSKH
Nicotiana_tabac   SLAACADVPVTIKDPGCTRKTFPNYFDVLQQYSKH
Convolvulus_arv   SLAACADVPVTIKDPGCTRKTFPDYFDVLSKFSKH
Euphorbia_heter   SLAACGDVPVTIKDPGCTRKTFPDYFQVLQSFTK-
Abutilon_theoph   SLAACAEVPVTINDPGCTRKTFPDYFEVLERVTKH
Gossypium_hirsu   SLAACAEVPVTIKDPGCTRKTFPDYFEVLARVTKH
Plantago_lanceo   -----------------------------------
Amaranthus_livi   -----------------------------------
Amaranthus_tube   SLAACADVPVTILDPGCTRKTFPDYFDVLEKFAKH
Amaranthus_rudi   SLAACADVPVTILDPGCTRKTFPDYFDVLEKFAKH
Amaranthus_palm   SLAACADVPVTILDPGCTRKTFPDYFDVLEKFAKH
Amaranthus_hybr   SLAACADVPVTILDPGCTRKTFPDYFEVLEKFAKH
Amaranthus_viri   SLAACADVPVTILDPGCTRKTFPDYFEVLEKFAKH
Kochia_scoparia   SLAACADVPVTIKDPGCTRKTFPDYFDVLERFAKH
Chenopodium_alb   SLAACADVPVTINDPGCTRKTFPDYFDVLERFAKH
Amaranthus_grae   SLAACADVPVTILD---------------------
Petunia_x_hybri   SLAACADVPVTINDPGCTRKTFPNYFDVLQQYSKH
Ambrosia_trifid   SLAACADVPVTIKDPACTRKTFPDYFEVLERFTKH
Conyza_canadens   SLAACAEVPVTIKDPGCTRKTFPDYFEVLERYTKH
Cirsium_setosum   SLAACADVPVTINDPGCTRKTFPDYFEVLQKFAKN
Conyza_sumatren   SLAACADVPVTIKDPSCTRKTFPDYFEVLQRFAKH
Erigeron_annuus   -----------------------------------

cons